HCSGD entry for TMED3
1. General information
| Official gene symbol | TMED3 |
|---|---|
| Entrez ID | 23423 |
| Gene full name | transmembrane emp24 protein transport domain containing 3 |
| Other gene symbols | C15orf22 P24B p26 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030126 | COPI vesicle coat | ISS | cellular_component |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0033116 | Endoplasmic reticulum-Golgi intermediate compartment membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2178872421 | 0.8887723149 | 0.8976381437 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1103018795 |
| GSE13712_SHEAR | Up | 0.0578084875 |
| GSE13712_STATIC | Up | 0.2444664370 |
| GSE19018 | Up | 0.1750014056 |
| GSE19899_A1 | Up | 0.0757304201 |
| GSE19899_A2 | Up | 0.1007207138 |
| PubMed_21979375_A1 | Up | 0.0701092763 |
| PubMed_21979375_A2 | Up | 0.2350849430 |
| GSE35957 | Down | -0.0843356410 |
| GSE36640 | Up | 0.2464404110 |
| GSE54402 | Up | 0.1431351322 |
| GSE9593 | Up | 0.1632474566 |
| GSE43922 | Up | 0.0061115040 |
| GSE24585 | Down | -0.3696964520 |
| GSE37065 | Down | -0.1600513087 |
| GSE28863_A1 | Up | 0.4677899028 |
| GSE28863_A2 | Up | 0.4916208870 |
| GSE28863_A3 | Down | -0.1751240707 |
| GSE28863_A4 | Down | -0.1189581384 |
| GSE48662 | Up | 0.2533409168 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005140 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
