HCSGD entry for PUM2
1. General information
| Official gene symbol | PUM2 |
|---|---|
| Entrez ID | 23369 |
| Gene full name | pumilio homolog 2 (Drosophila) |
| Other gene symbols | PUMH2 PUML2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006417 | Regulation of translation | IEA | biological_process |
| GO:0010494 | Cytoplasmic stress granule | IEA ISS | cellular_component |
| GO:0034063 | Stress granule assembly | IEA | biological_process |
| GO:0048471 | Perinuclear region of cytoplasm | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6384577828 | 0.3600680103 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0134823972 |
| GSE13712_SHEAR | Down | -0.1671722055 |
| GSE13712_STATIC | Down | -0.2675721679 |
| GSE19018 | Down | -0.0336280614 |
| GSE19899_A1 | Up | 0.0849620256 |
| GSE19899_A2 | Down | -0.1453579902 |
| PubMed_21979375_A1 | Up | 0.0204168785 |
| PubMed_21979375_A2 | Up | 0.0109259728 |
| GSE35957 | Up | 0.0675991401 |
| GSE36640 | Down | -0.1635833274 |
| GSE54402 | Up | 0.0167477189 |
| GSE9593 | Up | 0.0909679512 |
| GSE43922 | Up | 0.1330439323 |
| GSE24585 | Down | -0.4428782120 |
| GSE37065 | Up | 0.0780692956 |
| GSE28863_A1 | Up | 0.2850236003 |
| GSE28863_A2 | Up | 0.3866377552 |
| GSE28863_A3 | Down | -0.5695323880 |
| GSE28863_A4 | Down | -0.3037640287 |
| GSE48662 | Up | 0.5368162042 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125a-5p | MIMAT0000443 | MIRT021291 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT024251 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025372 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT025614 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039900 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
