HCSGD entry for VPS8
1. General information
| Official gene symbol | VPS8 |
|---|---|
| Entrez ID | 23355 |
| Gene full name | vacuolar protein sorting 8 homolog (S. cerevisiae) |
| Other gene symbols | KIAA0804 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0905499981 | 0.9530182858 | 0.6328641795 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1084245318 |
| GSE13712_SHEAR | Down | -0.1480437779 |
| GSE13712_STATIC | Up | 0.2273316727 |
| GSE19018 | Up | 0.1881591317 |
| GSE19899_A1 | Up | 0.1827495090 |
| GSE19899_A2 | Up | 0.4482891331 |
| PubMed_21979375_A1 | Up | 0.7098751861 |
| PubMed_21979375_A2 | Up | 1.5044867069 |
| GSE35957 | Up | 0.0042495318 |
| GSE36640 | Up | 0.0765166837 |
| GSE54402 | Up | 0.1912675542 |
| GSE9593 | Down | -0.1468829190 |
| GSE43922 | Up | 0.1231666444 |
| GSE24585 | Up | 0.0605489782 |
| GSE37065 | Up | 0.0591612270 |
| GSE28863_A1 | Up | 0.0512807838 |
| GSE28863_A2 | Up | 0.3110615845 |
| GSE28863_A3 | Down | -0.5476258834 |
| GSE28863_A4 | Down | -0.1316634331 |
| GSE48662 | Up | 0.1520330091 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018846 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
