HCSGD entry for TTC28
1. General information
| Official gene symbol | TTC28 |
|---|---|
| Entrez ID | 23331 |
| Gene full name | tetratricopeptide repeat domain 28 |
| Other gene symbols | TPRBK |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000922 | Spindle pole | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005815 | Microtubule organizing center | IEA | cellular_component |
| GO:0007067 | Mitosis | IEA | biological_process |
| GO:0030496 | Midbody | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7536040310 | 0.0417344934 | 0.9999902473 | 0.3842519762 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3365525162 |
| GSE13712_SHEAR | Down | -0.7636427791 |
| GSE13712_STATIC | Down | -0.3405779525 |
| GSE19018 | Down | -0.1251606564 |
| GSE19899_A1 | Down | -0.2892336548 |
| GSE19899_A2 | Down | -0.4396551604 |
| PubMed_21979375_A1 | Down | -0.3831683945 |
| PubMed_21979375_A2 | Down | -0.1241631122 |
| GSE35957 | Up | 0.2055817850 |
| GSE36640 | Down | -0.0105661149 |
| GSE54402 | Down | -0.8783818339 |
| GSE9593 | Up | 0.1772274085 |
| GSE43922 | Down | -0.4135591044 |
| GSE24585 | Up | 0.1965359151 |
| GSE37065 | Down | -0.1515191165 |
| GSE28863_A1 | Up | 1.1439562991 |
| GSE28863_A2 | Up | 0.3842309946 |
| GSE28863_A3 | Down | -0.0571126647 |
| GSE28863_A4 | Down | -0.1415784260 |
| GSE48662 | Up | 0.1846337011 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043918 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-182-5p | MIMAT0000259 | MIRT047205 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
