HCSGD entry for AGTPBP1
1. General information
| Official gene symbol | AGTPBP1 |
|---|---|
| Entrez ID | 23287 |
| Gene full name | ATP/GTP binding protein 1 |
| Other gene symbols | CCP1 NNA1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001754 | Eye photoreceptor cell differentiation | ISS | biological_process |
| GO:0004181 | Metallocarboxypeptidase activity | ISS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005739 | Mitochondrion | ISS | cellular_component |
| GO:0005829 | Cytosol | ISS | cellular_component |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0007005 | Mitochondrion organization | ISS | biological_process |
| GO:0007628 | Adult walking behavior | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0015631 | Tubulin binding | ISS | molecular_function |
| GO:0021702 | Cerebellar Purkinje cell differentiation | ISS | biological_process |
| GO:0021772 | Olfactory bulb development | ISS | biological_process |
| GO:0035609 | C-terminal protein deglutamylation | ISS | biological_process |
| GO:0035610 | Protein side chain deglutamylation | ISS | biological_process |
| GO:0042133 | Neurotransmitter metabolic process | IEA | biological_process |
| GO:0050905 | Neuromuscular process | ISS | biological_process |
| GO:0060041 | Retina development in camera-type eye | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9781102200 | 0.0292724289 | 0.9999902473 | 0.3239605296 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.4164631507 |
| GSE13712_SHEAR | Down | -0.7663199374 |
| GSE13712_STATIC | Down | -0.3967702906 |
| GSE19018 | Up | 0.1669362787 |
| GSE19899_A1 | Down | -0.0200029292 |
| GSE19899_A2 | Down | -0.0693744190 |
| PubMed_21979375_A1 | Up | 0.3983361725 |
| PubMed_21979375_A2 | Down | -0.6234025093 |
| GSE35957 | Up | 0.0824039433 |
| GSE36640 | Down | -0.4861786238 |
| GSE54402 | Down | -0.1268742095 |
| GSE9593 | Up | 0.1106071750 |
| GSE43922 | Down | -0.2507578833 |
| GSE24585 | Down | -0.1301575896 |
| GSE37065 | Down | -0.1770259231 |
| GSE28863_A1 | Down | -0.2306617478 |
| GSE28863_A2 | Up | 0.0177009991 |
| GSE28863_A3 | Down | -0.4613788720 |
| GSE28863_A4 | Down | -0.0121393782 |
| GSE48662 | Down | -0.2457583622 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019782 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028252 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
