HCSGD entry for OTUD3
1. General information
| Official gene symbol | OTUD3 |
|---|---|
| Entrez ID | 23252 |
| Gene full name | OTU domain containing 3 |
| Other gene symbols | DUBA4 RP11-460G22.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004843 | Ubiquitin-specific protease activity | IDA | molecular_function |
| GO:0006508 | Proteolysis | IEA | biological_process |
| GO:0035871 | Protein K11-linked deubiquitination | IDA | biological_process |
| GO:0044313 | Protein K6-linked deubiquitination | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0267517572 | 0.4991879526 | 0.3810243506 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3297277202 |
| GSE13712_SHEAR | Up | 0.0585428258 |
| GSE13712_STATIC | Down | -0.7101248576 |
| GSE19018 | Down | -0.2156373072 |
| GSE19899_A1 | Up | 0.1866058487 |
| GSE19899_A2 | Up | 1.8899630664 |
| PubMed_21979375_A1 | Up | 0.7750727189 |
| PubMed_21979375_A2 | Up | 1.9401164392 |
| GSE35957 | Up | 0.1693834241 |
| GSE36640 | Up | 0.3208509438 |
| GSE54402 | Up | 0.5404873373 |
| GSE9593 | Down | -0.2089445718 |
| GSE43922 | Up | 1.0644465419 |
| GSE24585 | Down | -0.3278459050 |
| GSE37065 | Down | -0.0601548973 |
| GSE28863_A1 | Down | -0.3622397828 |
| GSE28863_A2 | Up | 0.2445309647 |
| GSE28863_A3 | Down | -0.2567231979 |
| GSE28863_A4 | Down | -0.0150558648 |
| GSE48662 | Down | -0.2512878494 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026967 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
