HCSGD entry for RPRD2
1. General information
| Official gene symbol | RPRD2 |
|---|---|
| Entrez ID | 23248 |
| Gene full name | regulation of nuclear pre-mRNA domain containing 2 |
| Other gene symbols | KIAA0460 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016591 | DNA-directed RNA polymerase II, holoenzyme | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0278419855 | 0.9317027317 | 0.3871256735 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1805336390 |
| GSE13712_SHEAR | Down | -0.0799675541 |
| GSE13712_STATIC | Up | 0.0147321528 |
| GSE19018 | Up | 0.3850023221 |
| GSE19899_A1 | Up | 0.1859111669 |
| GSE19899_A2 | Up | 0.6450619734 |
| PubMed_21979375_A1 | Down | -0.1883610431 |
| PubMed_21979375_A2 | Up | 0.8713666636 |
| GSE35957 | Down | -0.1493264482 |
| GSE36640 | Up | 0.0025463818 |
| GSE54402 | Up | 0.0843258401 |
| GSE9593 | Down | -0.2427202795 |
| GSE43922 | Up | 0.1640763055 |
| GSE24585 | Up | 0.4447657172 |
| GSE37065 | Up | 0.2562804920 |
| GSE28863_A1 | Up | 0.6404306294 |
| GSE28863_A2 | Up | 0.6934370305 |
| GSE28863_A3 | Down | -0.2289378308 |
| GSE28863_A4 | Down | -0.3524619648 |
| GSE48662 | Up | 0.3686050777 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT024055 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030338 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT032044 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038455 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-5p | MIMAT0003886 | MIRT039187 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044769 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT050369 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051632 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
