HCSGD entry for SYT11
1. General information
| Official gene symbol | SYT11 |
|---|---|
| Entrez ID | 23208 |
| Gene full name | synaptotagmin XI |
| Other gene symbols | SYT12 sytXI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005215 | Transporter activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005887 | Integral component of plasma membrane | IEA | cellular_component |
| GO:0008021 | Synaptic vesicle | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030672 | Synaptic vesicle membrane | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4676977736 | 0.5326301204 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2356472767 |
| GSE13712_SHEAR | Down | -0.0957049850 |
| GSE13712_STATIC | Down | -0.4253925924 |
| GSE19018 | Down | -0.3719639822 |
| GSE19899_A1 | Up | 0.1228280988 |
| GSE19899_A2 | Up | 0.1792771381 |
| PubMed_21979375_A1 | Down | -0.4265005659 |
| PubMed_21979375_A2 | Up | 0.1022731849 |
| GSE35957 | Down | -0.3286458578 |
| GSE36640 | Up | 0.5129938929 |
| GSE54402 | Up | 0.2812687092 |
| GSE9593 | Down | -0.3008439333 |
| GSE43922 | Up | 0.0855497386 |
| GSE24585 | Down | -0.0453022193 |
| GSE37065 | Up | 0.0608495407 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0982633615 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047413 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051123 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
