HCSGD entry for LARP4B
1. General information
| Official gene symbol | LARP4B |
|---|---|
| Entrez ID | 23185 |
| Gene full name | La ribonucleoprotein domain family, member 4B |
| Other gene symbols | KIAA0217 LARP5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0010494 | Cytoplasmic stress granule | IDA | cellular_component |
| GO:0042788 | Polysomal ribosome | IDA | cellular_component |
| GO:0045727 | Positive regulation of translation | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4391407773 | 0.7771620683 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0443932867 |
| GSE13712_SHEAR | Up | 0.0763706718 |
| GSE13712_STATIC | Up | 0.0072885695 |
| GSE19018 | Down | -0.2108655868 |
| GSE19899_A1 | Down | -0.2424220843 |
| GSE19899_A2 | Up | 0.2024223947 |
| PubMed_21979375_A1 | Up | 0.2768678599 |
| PubMed_21979375_A2 | Up | 0.0496366924 |
| GSE35957 | Up | 0.2117732553 |
| GSE36640 | Down | -0.1553100544 |
| GSE54402 | Up | 0.2327776432 |
| GSE9593 | Up | 0.1328617971 |
| GSE43922 | Down | -0.0745554354 |
| GSE24585 | Up | 0.0770700895 |
| GSE37065 | Down | -0.0531950973 |
| GSE28863_A1 | Up | 0.2313873505 |
| GSE28863_A2 | Up | 0.3544682752 |
| GSE28863_A3 | Down | -0.0558136427 |
| GSE28863_A4 | Up | 0.0927496617 |
| GSE48662 | Up | 0.1560615722 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027047 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028584 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032113 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
