HCSGD entry for MESDC2
1. General information
| Official gene symbol | MESDC2 |
|---|---|
| Entrez ID | 23184 |
| Gene full name | mesoderm development candidate 2 |
| Other gene symbols | BOCA MESD |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006457 | Protein folding | ISS | biological_process |
| GO:0007498 | Mesoderm development | NAS | biological_process |
| GO:0016055 | Wnt signaling pathway | IEA | biological_process |
| GO:0034394 | Protein localization to cell surface | IEA | biological_process |
| GO:0050750 | Low-density lipoprotein particle receptor binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6432362106 | 0.4321410509 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0376943360 |
| GSE13712_SHEAR | Up | 0.1017961244 |
| GSE13712_STATIC | Up | 0.1677681280 |
| GSE19018 | Down | -0.1314930415 |
| GSE19899_A1 | Down | -0.4166055583 |
| GSE19899_A2 | Down | -0.2058518843 |
| PubMed_21979375_A1 | Down | -0.5432660340 |
| PubMed_21979375_A2 | Down | -0.2890544958 |
| GSE35957 | Down | -0.0684544833 |
| GSE36640 | Down | -0.1002899353 |
| GSE54402 | Down | -0.3832692172 |
| GSE9593 | Up | 0.1039978109 |
| GSE43922 | Up | 0.0479259550 |
| GSE24585 | Up | 0.1934436512 |
| GSE37065 | Up | 0.2281671416 |
| GSE28863_A1 | Up | 0.3439863200 |
| GSE28863_A2 | Up | 0.3343085790 |
| GSE28863_A3 | Down | -0.0963151488 |
| GSE28863_A4 | Up | 0.0332274169 |
| GSE48662 | Up | 0.2291762188 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT021164 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022467 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029302 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046420 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046719 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
