HCSGD entry for GGA3
1. General information
| Official gene symbol | GGA3 |
|---|---|
| Entrez ID | 23163 |
| Gene full name | golgi-associated, gamma adaptin ear containing, ARF binding protein 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | IDA IEA | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA NAS | biological_process |
| GO:0010008 | Endosome membrane | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0030131 | Clathrin adaptor complex | IEA | cellular_component |
| GO:0030306 | ADP-ribosylation factor binding | IDA IEA | molecular_function |
| GO:0045732 | Positive regulation of protein catabolic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1285942897 | 0.8893376088 | 0.7283689047 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0864259449 |
| GSE13712_SHEAR | Up | 0.1571173081 |
| GSE13712_STATIC | Up | 0.5910546766 |
| GSE19018 | Up | 0.0340882522 |
| GSE19899_A1 | Down | -0.0043698856 |
| GSE19899_A2 | Up | 0.2587797688 |
| PubMed_21979375_A1 | Down | -0.1339027555 |
| PubMed_21979375_A2 | Up | 0.9797464159 |
| GSE35957 | Down | -0.2489125213 |
| GSE36640 | Up | 0.0556104797 |
| GSE54402 | Up | 0.2770639633 |
| GSE9593 | Down | -0.0021530953 |
| GSE43922 | Up | 0.2670718315 |
| GSE24585 | Up | 0.1540376490 |
| GSE37065 | Up | 0.0766437953 |
| GSE28863_A1 | Up | 0.1756174457 |
| GSE28863_A2 | Up | 0.1790218093 |
| GSE28863_A3 | Up | 0.1107645517 |
| GSE28863_A4 | Down | -0.0331419459 |
| GSE48662 | Down | -0.3317030047 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026056 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027133 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029653 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037465 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038104 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040417 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-23a-3p | MIMAT0000078 | MIRT050447 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
