HCSGD entry for NCDN
1. General information
| Official gene symbol | NCDN |
|---|---|
| Entrez ID | 23154 |
| Gene full name | neurochondrin |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005829 | Cytosol | IEA ISS | cellular_component |
| GO:0030424 | Axon | ISS | cellular_component |
| GO:0030425 | Dendrite | IEA ISS | cellular_component |
| GO:0031175 | Neuron projection development | IEA ISS | biological_process |
| GO:0043025 | Neuronal cell body | IEA ISS | cellular_component |
| GO:0045453 | Bone resorption | IEA | biological_process |
| GO:0048168 | Regulation of neuronal synaptic plasticity | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0396160822 | 0.9792547852 | 0.4478523401 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1015573389 |
| GSE13712_SHEAR | Down | -0.1062391734 |
| GSE13712_STATIC | Up | 0.0947828609 |
| GSE19018 | Down | -0.1657731397 |
| GSE19899_A1 | Up | 0.1542801744 |
| GSE19899_A2 | Up | 0.4956252318 |
| PubMed_21979375_A1 | Up | 0.7956375083 |
| PubMed_21979375_A2 | Up | 0.6035125393 |
| GSE35957 | Up | 0.1172509492 |
| GSE36640 | Up | 0.4522830060 |
| GSE54402 | Up | 0.2163464010 |
| GSE9593 | Down | -0.0025330005 |
| GSE43922 | Up | 0.6618269887 |
| GSE24585 | Up | 0.0292493026 |
| GSE37065 | Down | -0.1149037000 |
| GSE28863_A1 | Up | 0.2137635857 |
| GSE28863_A2 | Up | 0.4284031057 |
| GSE28863_A3 | Up | 0.1081862113 |
| GSE28863_A4 | Down | -0.1192340268 |
| GSE48662 | Up | 0.3916389968 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT023258 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-421 | MIMAT0003339 | MIRT039427 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040919 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049742 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
