HCSGD entry for POGZ
1. General information
| Official gene symbol | POGZ |
|---|---|
| Entrez ID | 23126 |
| Gene full name | pogo transposable element with ZNF domain |
| Other gene symbols | SUHW5 ZNF280E ZNF635 ZNF635m |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000790 | Nuclear chromatin | IDA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0007064 | Mitotic sister chromatid cohesion | IMP | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0051382 | Kinetochore assembly | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8224602295 | 0.0942078075 | 0.9999902473 | 0.5846837303 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1858291004 |
| GSE13712_SHEAR | Up | 0.2096511529 |
| GSE13712_STATIC | Down | -0.0666963867 |
| GSE19018 | Up | 0.0754312304 |
| GSE19899_A1 | Down | -0.0420536651 |
| GSE19899_A2 | Down | -0.4309083420 |
| PubMed_21979375_A1 | Down | -0.4591145488 |
| PubMed_21979375_A2 | Down | -0.0767515099 |
| GSE35957 | Down | -0.3677045315 |
| GSE36640 | Down | -0.4738464503 |
| GSE54402 | Down | -0.0105340988 |
| GSE9593 | Down | -0.3670798858 |
| GSE43922 | Down | -0.0913233185 |
| GSE24585 | Up | 0.2372329862 |
| GSE37065 | Up | 0.0653888043 |
| GSE28863_A1 | Up | 0.5438751606 |
| GSE28863_A2 | Up | 0.3403570988 |
| GSE28863_A3 | Down | -0.2914193315 |
| GSE28863_A4 | Down | -0.4059321169 |
| GSE48662 | Down | -0.0324223926 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020173 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-9-5p | MIMAT0000441 | MIRT021320 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT024203 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025467 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031164 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042912 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046218 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049685 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050579 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050945 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
