HCSGD entry for ATP10B
1. General information
| Official gene symbol | ATP10B |
|---|---|
| Entrez ID | 23120 |
| Gene full name | ATPase, class V, type 10B |
| Other gene symbols | ATPVB |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000287 | Magnesium ion binding | IEA | molecular_function |
| GO:0004012 | Phospholipid-translocating ATPase activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0019829 | Cation-transporting ATPase activity | IEA | molecular_function |
| GO:0030659 | Cytoplasmic vesicle membrane | IEA | cellular_component |
| GO:0045332 | Phospholipid translocation | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5571267391 | 0.9221954333 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0265901975 |
| GSE13712_SHEAR | Down | -0.0910660511 |
| GSE13712_STATIC | Down | -0.0119939208 |
| GSE19018 | Up | 0.2168894898 |
| GSE19899_A1 | Up | 0.1750023626 |
| GSE19899_A2 | Up | 0.1465097556 |
| PubMed_21979375_A1 | Up | 0.0276255213 |
| PubMed_21979375_A2 | Down | -0.1097126034 |
| GSE35957 | Up | 0.1699497258 |
| GSE36640 | Up | 0.1714574597 |
| GSE54402 | Up | 0.1802056836 |
| GSE9593 | Down | -0.1398943238 |
| GSE43922 | Up | 0.0625940503 |
| GSE24585 | Up | 0.0659286443 |
| GSE37065 | Down | -0.0348946191 |
| GSE28863_A1 | Down | -0.0740355285 |
| GSE28863_A2 | Up | 0.0596576180 |
| GSE28863_A3 | Up | 0.1837971298 |
| GSE28863_A4 | Up | 0.0658675239 |
| GSE48662 | Down | -0.0610922277 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017827 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019342 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
