HCSGD entry for FTSJD2
1. General information
| Official gene symbol | FTSJD2 |
|---|---|
| Entrez ID | 23070 |
| Gene full name | FtsJ methyltransferase domain containing 2 |
| Other gene symbols | KIAA0082 MTr1 hMTr1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0004483 | MRNA (nucleoside-2'-O-)-methyltransferase activity | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006370 | 7-methylguanosine mRNA capping | IDA IMP | biological_process |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
| GO:0080009 | MRNA methylation | IDA | biological_process |
| GO:0097309 | Cap1 mRNA methylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1334142434 | 0.3927299229 | 0.7395948399 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2344826331 |
| GSE13712_SHEAR | Up | 0.5239967855 |
| GSE13712_STATIC | Up | 0.7237729600 |
| GSE19018 | Down | -0.2223019925 |
| GSE19899_A1 | Down | -0.3661482565 |
| GSE19899_A2 | Up | 0.1297724555 |
| PubMed_21979375_A1 | Up | 0.6312068232 |
| PubMed_21979375_A2 | Up | 0.3605563592 |
| GSE35957 | Down | -0.0703382882 |
| GSE36640 | Up | 0.1396218874 |
| GSE54402 | Down | -0.2823117740 |
| GSE9593 | Up | 0.0706524809 |
| GSE43922 | Down | -0.0579537280 |
| GSE24585 | Down | -0.0537540769 |
| GSE37065 | Up | 0.3109545511 |
| GSE28863_A1 | Up | 0.1370565699 |
| GSE28863_A2 | Up | 0.6394635974 |
| GSE28863_A3 | Down | -0.8779041583 |
| GSE28863_A4 | Down | -0.3006730403 |
| GSE48662 | Up | 0.3834978632 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017033 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036489 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041458 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
