HCSGD entry for GGA2
1. General information
| Official gene symbol | GGA2 |
|---|---|
| Entrez ID | 23062 |
| Gene full name | golgi-associated, gamma adaptin ear containing, ARF binding protein 2 |
| Other gene symbols | VEAR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | IDA | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA NAS | biological_process |
| GO:0010008 | Endosome membrane | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0030131 | Clathrin adaptor complex | IEA | cellular_component |
| GO:0030136 | Clathrin-coated vesicle | IDA | cellular_component |
| GO:0030306 | ADP-ribosylation factor binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7066676152 | 0.1864116067 | 0.9999902473 | 0.8372934983 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1226233471 |
| GSE13712_SHEAR | Down | -0.0847050844 |
| GSE13712_STATIC | Up | 0.0102171851 |
| GSE19018 | Up | 0.1404456651 |
| GSE19899_A1 | Down | -0.0803209255 |
| GSE19899_A2 | Down | -0.3145738500 |
| PubMed_21979375_A1 | Down | -0.4830195994 |
| PubMed_21979375_A2 | Down | -0.3833043730 |
| GSE35957 | Down | -0.0612351837 |
| GSE36640 | Down | -0.4934369978 |
| GSE54402 | Up | 0.2896510225 |
| GSE9593 | Down | -0.0852924690 |
| GSE43922 | Down | -0.4689495228 |
| GSE24585 | Down | -0.0491950701 |
| GSE37065 | Up | 0.0566551091 |
| GSE28863_A1 | Up | 0.3452869298 |
| GSE28863_A2 | Up | 0.6313104173 |
| GSE28863_A3 | Down | -0.4335132534 |
| GSE28863_A4 | Up | 0.0512204424 |
| GSE48662 | Up | 0.2918433393 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022714 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030525 | Microarray | Functional MTI (Weak) | 19296935 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049383 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050070 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
