HCSGD entry for TBC1D9B
1. General information
| Official gene symbol | TBC1D9B |
|---|---|
| Entrez ID | 23061 |
| Gene full name | TBC1 domain family, member 9B (with GRAM domain) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005097 | Rab GTPase activator activity | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4917981688 | 0.2105577790 | 0.9999902473 | 0.8862181804 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3946761673 |
| GSE13712_SHEAR | Down | -0.2110183222 |
| GSE13712_STATIC | Down | -0.0967793856 |
| GSE19018 | Up | 0.3744031167 |
| GSE19899_A1 | Down | -0.2010798614 |
| GSE19899_A2 | Down | -0.0699370482 |
| PubMed_21979375_A1 | Down | -0.0450724969 |
| PubMed_21979375_A2 | Up | 0.5173747631 |
| GSE35957 | Up | 0.1716221284 |
| GSE36640 | Up | 0.5804095618 |
| GSE54402 | Down | -0.1248447665 |
| GSE9593 | Up | 0.3583074362 |
| GSE43922 | Up | 0.0044432744 |
| GSE24585 | Down | -0.2661945801 |
| GSE37065 | Down | -0.2866636779 |
| GSE28863_A1 | Up | 0.0519680729 |
| GSE28863_A2 | Up | 0.2523020785 |
| GSE28863_A3 | Down | -0.1402172181 |
| GSE28863_A4 | Down | -0.3202978775 |
| GSE48662 | Up | 0.2755947825 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7d-5p | MIMAT0000065 | MIRT032112 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-940 | MIMAT0004983 | MIRT036620 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036808 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-3p | MIMAT0003887 | MIRT039093 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041369 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-191-3p | MIMAT0001618 | MIRT042393 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30e-3p | MIMAT0000693 | MIRT044119 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049656 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
