HCSGD entry for FNBP1
1. General information
| Official gene symbol | FNBP1 |
|---|---|
| Entrez ID | 23048 |
| Gene full name | formin binding protein 1 |
| Other gene symbols | FBP17 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005764 | Lysosome | IEA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0005905 | Coated pit | IEA | cellular_component |
| GO:0005938 | Cell cortex | IEA | cellular_component |
| GO:0006897 | Endocytosis | IEA | biological_process |
| GO:0008289 | Lipid binding | IEA | molecular_function |
| GO:0016023 | Cytoplasmic membrane-bounded vesicle | IEA | cellular_component |
| GO:0042802 | Identical protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7819690703 | 0.3475962425 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0833584156 |
| GSE13712_SHEAR | Down | -0.2439503915 |
| GSE13712_STATIC | Down | -0.3673054520 |
| GSE19018 | Down | -0.0055636864 |
| GSE19899_A1 | Down | -0.1542693094 |
| GSE19899_A2 | Down | -0.0706374891 |
| PubMed_21979375_A1 | Up | 0.0276302281 |
| PubMed_21979375_A2 | Up | 0.1137158409 |
| GSE35957 | Up | 0.2358528601 |
| GSE36640 | Up | 0.0889711297 |
| GSE54402 | Down | -0.2010415209 |
| GSE9593 | Up | 0.0739527084 |
| GSE43922 | Down | -0.0120979097 |
| GSE24585 | Up | 0.1651526120 |
| GSE37065 | Down | -0.2328207710 |
| GSE28863_A1 | Up | 0.2981143002 |
| GSE28863_A2 | Down | -0.0959100445 |
| GSE28863_A3 | Down | -0.0433164840 |
| GSE28863_A4 | Up | 0.0097535004 |
| GSE48662 | Up | 0.1893199188 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021456 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022054 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026653 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030906 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039958 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044298 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050292 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051078 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
