HCSGD entry for PDZD2
1. General information
| Official gene symbol | PDZD2 |
|---|---|
| Entrez ID | 23037 |
| Gene full name | PDZ domain containing 2 |
| Other gene symbols | AIPC PAPIN PDZK3 PIN1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | ISS | cellular_component |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | ISS | cellular_component |
| GO:0005911 | Cell-cell junction | ISS | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0286223320 | 0.9822695110 | 0.3927398230 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1394549949 |
| GSE13712_SHEAR | Up | 1.2083326080 |
| GSE13712_STATIC | Up | 0.5956476988 |
| GSE19018 | Down | -0.0842210421 |
| GSE19899_A1 | Up | 0.2119538086 |
| GSE19899_A2 | Up | 0.3107045373 |
| PubMed_21979375_A1 | Up | 0.4332182422 |
| PubMed_21979375_A2 | Up | 0.6324498783 |
| GSE35957 | Down | -0.0645373671 |
| GSE36640 | Up | 0.1657164629 |
| GSE54402 | Up | 0.4041494042 |
| GSE9593 | Down | -0.1776600804 |
| GSE43922 | Up | 0.1377927287 |
| GSE24585 | Up | 0.6099612359 |
| GSE37065 | Down | -0.0608675155 |
| GSE28863_A1 | Down | -0.0505164455 |
| GSE28863_A2 | Up | 0.1041673478 |
| GSE28863_A3 | Up | 0.1609441781 |
| GSE28863_A4 | Up | 0.0336970679 |
| GSE48662 | Down | -0.0314407875 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018629 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
