HCSGD entry for LIMCH1
1. General information
| Official gene symbol | LIMCH1 |
|---|---|
| Entrez ID | 22998 |
| Gene full name | LIM and calponin homology domains 1 |
| Other gene symbols | LIMCH1A LMO7B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0031032 | Actomyosin structure organization | IEA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5593373466 | 0.0070133468 | 0.9999902473 | 0.1672086051 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.8344605939 |
| GSE13712_SHEAR | Down | -0.5863368613 |
| GSE13712_STATIC | Down | -0.9225828219 |
| GSE19018 | Down | -0.8262183924 |
| GSE19899_A1 | Down | -0.0970515557 |
| GSE19899_A2 | Down | -0.9073051590 |
| PubMed_21979375_A1 | Down | -0.3273842783 |
| PubMed_21979375_A2 | Down | -0.0863642025 |
| GSE35957 | Down | -0.3363928081 |
| GSE36640 | Up | 3.9510544279 |
| GSE54402 | Down | -1.1205293536 |
| GSE9593 | Down | -0.6538132761 |
| GSE43922 | Down | -0.2370845998 |
| GSE24585 | Up | 0.0960027139 |
| GSE37065 | Up | 0.5783908098 |
| GSE28863_A1 | Down | -0.0562449744 |
| GSE28863_A2 | Up | 0.0810091434 |
| GSE28863_A3 | Up | 0.0515391135 |
| GSE28863_A4 | Down | -0.0568282963 |
| GSE48662 | Up | 0.2547513692 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT004891 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004891 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005201 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026786 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030976 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036885 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30e-5p | MIMAT0000692 | MIRT044140 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
