HCSGD entry for TTC39A

1. General information

Official gene symbolTTC39A
Entrez ID22996
Gene full nametetratricopeptide repeat domain 39A
Other gene symbolsC1orf34 DEME-6
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0008150Biological_processNDbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.61373569770.75834486150.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0489756951
GSE13712_SHEARDown-0.2947076381
GSE13712_STATICDown-0.2055777225
GSE19018Up0.2373347294
GSE19899_A1Up0.1970481147
GSE19899_A2Up0.1214117209
PubMed_21979375_A1Down-0.0297785519
PubMed_21979375_A2Down-0.0850046060
GSE35957Down-0.0155869992
GSE36640Up0.1008313293
GSE54402Down-0.0204315881
GSE9593Up0.0010914666
GSE43922Down-0.0398652747
GSE24585Up0.1687450182
GSE37065Down-0.1094740635
GSE28863_A1Down-0.1423599759
GSE28863_A2Up0.1297676538
GSE28863_A3Up0.4430559721
GSE28863_A4Down-0.0074753363
GSE48662Up0.0202982580

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-424-5pMIMAT0001341MIRT042435CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.