HCSGD entry for TRAK1
1. General information
| Official gene symbol | TRAK1 |
|---|---|
| Entrez ID | 22906 |
| Gene full name | trafficking protein, kinesin binding 1 |
| Other gene symbols | MILT1 OIP106 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | ISS | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005769 | Early endosome | IDA | cellular_component |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | ISS | biological_process |
| GO:0006493 | Protein O-linked glycosylation | ISS | biological_process |
| GO:0006605 | Protein targeting | ISS | biological_process |
| GO:0008333 | Endosome to lysosome transport | IDA | biological_process |
| GO:0050811 | GABA receptor binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3137543786 | 0.4211940010 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0094764828 |
| GSE13712_SHEAR | Up | 0.2577332435 |
| GSE13712_STATIC | Down | -0.1590028551 |
| GSE19018 | Up | 0.4331395026 |
| GSE19899_A1 | Down | -0.0149918978 |
| GSE19899_A2 | Up | 0.3998036684 |
| PubMed_21979375_A1 | Down | -0.6522643265 |
| PubMed_21979375_A2 | Down | -0.0535119182 |
| GSE35957 | Up | 0.3265747719 |
| GSE36640 | Up | 0.8427708324 |
| GSE54402 | Down | -0.1774997006 |
| GSE9593 | Up | 0.1615885884 |
| GSE43922 | Down | -0.2272114192 |
| GSE24585 | Up | 0.0766948614 |
| GSE37065 | Down | -0.2130985594 |
| GSE28863_A1 | Up | 0.1716698545 |
| GSE28863_A2 | Down | -0.0299431972 |
| GSE28863_A3 | Down | -0.1213238717 |
| GSE28863_A4 | Down | -0.0202981022 |
| GSE48662 | Down | -0.3188243950 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020781 | Reporter assay;Other | Functional MTI | 20584899 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042880 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048852 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
