HCSGD entry for FOXJ3
1. General information
| Official gene symbol | FOXJ3 |
|---|---|
| Entrez ID | 22887 |
| Gene full name | forkhead box J3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007389 | Pattern specification process | IBA | biological_process |
| GO:0008301 | DNA binding, bending | IBA | molecular_function |
| GO:0009790 | Embryo development | IBA | biological_process |
| GO:0009888 | Tissue development | IBA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0716678090 | 0.8770847574 | 0.5714536201 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2509760103 |
| GSE13712_SHEAR | Down | -0.0222060194 |
| GSE13712_STATIC | Down | -0.0409808668 |
| GSE19018 | Up | 0.0642383826 |
| GSE19899_A1 | Up | 0.2705097278 |
| GSE19899_A2 | Up | 0.5473477509 |
| PubMed_21979375_A1 | Up | 1.0528852118 |
| PubMed_21979375_A2 | Up | 0.7138053953 |
| GSE35957 | Up | 0.0225523883 |
| GSE36640 | Down | -0.3714658663 |
| GSE54402 | Up | 0.4911012844 |
| GSE9593 | Up | 0.1852265519 |
| GSE43922 | Up | 0.2481296191 |
| GSE24585 | Up | 0.2488585679 |
| GSE37065 | Up | 0.1031972884 |
| GSE28863_A1 | Down | -0.2324064050 |
| GSE28863_A2 | Up | 0.2423561823 |
| GSE28863_A3 | Down | -0.5513735063 |
| GSE28863_A4 | Down | -0.3080672807 |
| GSE48662 | Up | 0.0557275173 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT003107 | Luciferase reporter assay//qRT-PCR | Functional MTI | 19296470 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020156 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026044 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT028051 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-197-3p | MIMAT0000227 | MIRT048086 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050591 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052401 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
