HCSGD entry for RAB11FIP2
1. General information
| Official gene symbol | RAB11FIP2 |
|---|---|
| Entrez ID | 22841 |
| Gene full name | RAB11 family interacting protein 2 (class I) |
| Other gene symbols | Rab11-FIP2 nRip11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005768 | Endosome | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006833 | Water transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0019901 | Protein kinase binding | IPI | molecular_function |
| GO:0030010 | Establishment of cell polarity | IMP | biological_process |
| GO:0030659 | Cytoplasmic vesicle membrane | TAS | cellular_component |
| GO:0035773 | Insulin secretion involved in cellular response to glucose stimulus | ISS | biological_process |
| GO:0042803 | Protein homodimerization activity | IPI | molecular_function |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0045055 | Regulated secretory pathway | ISS | biological_process |
| GO:0055038 | Recycling endosome membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6984694085 | 0.0697946849 | 0.9999902473 | 0.4985253460 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1711065312 |
| GSE13712_SHEAR | Up | 0.3009325237 |
| GSE13712_STATIC | Up | 0.2542217185 |
| GSE19018 | Down | -0.5635507815 |
| GSE19899_A1 | Down | -0.6908587204 |
| GSE19899_A2 | Down | -0.3965638504 |
| PubMed_21979375_A1 | Up | 0.3984539383 |
| PubMed_21979375_A2 | Down | -0.3875105345 |
| GSE35957 | Up | 0.1154788489 |
| GSE36640 | Up | 0.3403571337 |
| GSE54402 | Down | -0.2346186985 |
| GSE9593 | Up | 0.2749771845 |
| GSE43922 | Down | -0.5095528185 |
| GSE24585 | Down | -0.3431502153 |
| GSE37065 | Down | -0.0226754288 |
| GSE28863_A1 | Down | -0.1396934805 |
| GSE28863_A2 | Down | -0.3165253533 |
| GSE28863_A3 | Down | -0.1613349657 |
| GSE28863_A4 | Down | -0.0108269809 |
| GSE48662 | Up | 0.4869868985 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT002812 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020855 | Reporter assay;Other | Functional MTI | 20584899 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024655 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026543 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030937 | Microarray | Functional MTI (Weak) | 18591254 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
