HCSGD entry for RNF44
1. General information
| Official gene symbol | RNF44 |
|---|---|
| Entrez ID | 22838 |
| Gene full name | ring finger protein 44 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0044397173 | 0.9690990692 | 0.1773174242 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2555015729 |
| GSE13712_SHEAR | Up | 0.2296656893 |
| GSE13712_STATIC | Down | -0.0681874840 |
| GSE19018 | Up | 0.2981990367 |
| GSE19899_A1 | Up | 0.5310697501 |
| GSE19899_A2 | Up | 1.3790683381 |
| PubMed_21979375_A1 | Up | 0.9163260926 |
| PubMed_21979375_A2 | Up | 2.3590861036 |
| GSE35957 | Down | -0.4143311710 |
| GSE36640 | Up | 1.5128825413 |
| GSE54402 | Up | 0.4559527041 |
| GSE9593 | Up | 0.1091169858 |
| GSE43922 | Up | 0.3914574020 |
| GSE24585 | Down | -0.2803471204 |
| GSE37065 | Up | 0.0190754946 |
| GSE28863_A1 | Down | -0.0293355793 |
| GSE28863_A2 | Up | 0.0360232591 |
| GSE28863_A3 | Up | 0.4679391947 |
| GSE28863_A4 | Down | -0.0989283009 |
| GSE48662 | Up | 0.3272861306 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019199 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-9-5p | MIMAT0000441 | MIRT021481 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT024187 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027333 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027854 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048841 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
