HCSGD entry for RHOBTB3
1. General information
| Official gene symbol | RHOBTB3 |
|---|---|
| Entrez ID | 22836 |
| Gene full name | Rho-related BTB domain containing 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IDA | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0006200 | ATP catabolic process | IDA | biological_process |
| GO:0007264 | Small GTPase mediated signal transduction | IEA | biological_process |
| GO:0008152 | Metabolic process | IDA | biological_process |
| GO:0016887 | ATPase activity | IDA | molecular_function |
| GO:0017137 | Rab GTPase binding | IPI | molecular_function |
| GO:0042147 | Retrograde transport, endosome to Golgi | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9349341666 | 0.0011146157 | 0.9999902473 | 0.0634088553 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0240634510 |
| GSE13712_SHEAR | Up | 0.9403794989 |
| GSE13712_STATIC | Up | 0.6857744111 |
| GSE19018 | Down | -0.7176267369 |
| GSE19899_A1 | Down | -1.5151847056 |
| GSE19899_A2 | Down | -1.2611554716 |
| PubMed_21979375_A1 | Down | -1.7588942046 |
| PubMed_21979375_A2 | Down | -1.0194199359 |
| GSE35957 | Down | -0.2382366328 |
| GSE36640 | Down | -0.7518766059 |
| GSE54402 | Down | -0.8019644503 |
| GSE9593 | Up | 0.2542682758 |
| GSE43922 | Down | -1.0134540295 |
| GSE24585 | Down | -0.6376796089 |
| GSE37065 | Down | -0.3680445396 |
| GSE28863_A1 | Up | 0.1413013761 |
| GSE28863_A2 | Down | -0.3018095368 |
| GSE28863_A3 | Down | -0.5397053968 |
| GSE28863_A4 | Down | -0.3590050475 |
| GSE48662 | Up | 0.0137217999 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024323 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026931 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027831 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
