HCSGD entry for NLGN4Y
1. General information
| Official gene symbol | NLGN4Y |
|---|---|
| Entrez ID | 22829 |
| Gene full name | neuroligin 4, Y-linked |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004872 | Receptor activity | IBA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005887 | Integral component of plasma membrane | IBA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0007416 | Synapse assembly | IBA | biological_process |
| GO:0009986 | Cell surface | IBA | cellular_component |
| GO:0014069 | Postsynaptic density | IEA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0042043 | Neurexin family protein binding | IBA | molecular_function |
| GO:0045202 | Synapse | IBA | cellular_component |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5442882755 | 0.4447169674 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0454771115 |
| GSE13712_SHEAR | Up | 0.0615830106 |
| GSE13712_STATIC | Down | -0.0338722720 |
| GSE19018 | Down | -0.0027706452 |
| GSE19899_A1 | Up | 0.1656928623 |
| GSE19899_A2 | Down | -0.0100423236 |
| PubMed_21979375_A1 | Up | 0.0803097808 |
| PubMed_21979375_A2 | Up | 0.2010041505 |
| GSE35957 | Down | -0.2496932485 |
| GSE36640 | Up | 0.0314653477 |
| GSE54402 | Up | 0.1518011913 |
| GSE9593 | Up | 0.0477924408 |
| GSE43922 | Down | -0.2105467993 |
| GSE24585 | Down | -0.0207673713 |
| GSE37065 | Up | 0.0835332676 |
| GSE28863_A1 | Down | -0.1622191380 |
| GSE28863_A2 | Up | 0.0266433468 |
| GSE28863_A3 | Up | 0.1476921476 |
| GSE28863_A4 | Up | 0.0088006030 |
| GSE48662 | Down | -0.1425572469 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018830 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023037 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
