HCSGD entry for COPZ1
1. General information
| Official gene symbol | COPZ1 |
|---|---|
| Entrez ID | 22818 |
| Gene full name | coatomer protein complex, subunit zeta 1 |
| Other gene symbols | COPZ HSPC181 zeta-COP zeta1-COP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006890 | Retrograde vesicle-mediated transport, Golgi to ER | TAS | biological_process |
| GO:0006891 | Intra-Golgi vesicle-mediated transport | IDA ISS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0030117 | Membrane coat | IEA | cellular_component |
| GO:0030126 | COPI vesicle coat | IDA ISS | cellular_component |
| GO:0048205 | COPI coating of Golgi vesicle | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5289570989 | 0.5112948178 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2648171983 |
| GSE13712_SHEAR | Down | -0.2533861379 |
| GSE13712_STATIC | Down | -0.1392239043 |
| GSE19018 | Up | 0.3678339364 |
| GSE19899_A1 | Up | 0.1393449770 |
| GSE19899_A2 | Up | 0.1394728401 |
| PubMed_21979375_A1 | Up | 0.2787890084 |
| PubMed_21979375_A2 | Down | -0.1669725686 |
| GSE35957 | Down | -0.3034855896 |
| GSE36640 | Down | -0.0925276127 |
| GSE54402 | Down | -0.0035081814 |
| GSE9593 | Up | 0.0202860032 |
| GSE43922 | Up | 0.0784935366 |
| GSE24585 | Down | -0.0683244195 |
| GSE37065 | Down | -0.1658851811 |
| GSE28863_A1 | Up | 0.2042027604 |
| GSE28863_A2 | Down | -0.1040270595 |
| GSE28863_A3 | Down | -0.4889325015 |
| GSE28863_A4 | Up | 0.0818247588 |
| GSE48662 | Up | 0.0772534218 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023745 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038152 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052614 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
