HCSGD entry for CLCA4
1. General information
| Official gene symbol | CLCA4 |
|---|---|
| Entrez ID | 22802 |
| Gene full name | chloride channel accessory 4 |
| Other gene symbols | CaCC CaCC2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005254 | Chloride channel activity | TAS | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0006820 | Anion transport | TAS | biological_process |
| GO:0006821 | Chloride transport | TAS | biological_process |
| GO:0015698 | Inorganic anion transport | TAS | biological_process |
| GO:0016324 | Apical plasma membrane | IEA | cellular_component |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:1902476 | Chloride transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6117051822 | 0.7673794993 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0814318572 |
| GSE13712_SHEAR | Down | -0.0924931424 |
| GSE13712_STATIC | Up | 0.0643285579 |
| GSE19018 | Up | 0.0989069910 |
| GSE19899_A1 | Up | 0.1098469176 |
| GSE19899_A2 | Up | 0.0166241375 |
| PubMed_21979375_A1 | Up | 0.6760124996 |
| PubMed_21979375_A2 | Down | -0.0199127689 |
| GSE35957 | Down | -0.1064906400 |
| GSE36640 | Up | 0.0198926087 |
| GSE54402 | Up | 0.1890956209 |
| GSE9593 | Up | 0.0378774794 |
| GSE43922 | Up | 0.0105778179 |
| GSE24585 | Down | -0.1403691598 |
| GSE37065 | Up | 0.0447317521 |
| GSE28863_A1 | Down | -0.1229735490 |
| GSE28863_A2 | Down | -0.0169042448 |
| GSE28863_A3 | Up | 0.1639784733 |
| GSE28863_A4 | Down | -0.0858533836 |
| GSE48662 | Up | 0.0340048834 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018387 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022037 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
