HCSGD entry for COG2
1. General information
| Official gene symbol | COG2 |
|---|---|
| Entrez ID | 22796 |
| Gene full name | component of oligomeric golgi complex 2 |
| Other gene symbols | LDLC |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005795 | Golgi stack | IDA | cellular_component |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0006486 | Protein glycosylation | TAS | biological_process |
| GO:0006886 | Intracellular protein transport | TAS | biological_process |
| GO:0006891 | Intra-Golgi vesicle-mediated transport | IMP | biological_process |
| GO:0007030 | Golgi organization | IEA IMP | biological_process |
| GO:0008565 | Protein transporter activity | IMP | molecular_function |
| GO:0009312 | Oligosaccharide biosynthetic process | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0017119 | Golgi transport complex | IDA IEA IMP | cellular_component |
| GO:0032403 | Protein complex binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9634898598 | 0.1138128263 | 0.9999902473 | 0.6467330311 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0011873578 |
| GSE13712_SHEAR | Down | -0.1459445201 |
| GSE13712_STATIC | Up | 0.0786235093 |
| GSE19018 | Down | -0.2654193410 |
| GSE19899_A1 | Down | -0.2280085864 |
| GSE19899_A2 | Down | -0.4149998797 |
| PubMed_21979375_A1 | Down | -0.5282379708 |
| PubMed_21979375_A2 | Up | 0.1882027845 |
| GSE35957 | Down | -0.0458537455 |
| GSE36640 | Down | -0.0114636880 |
| GSE54402 | Up | 0.0802212575 |
| GSE9593 | Down | -0.0052711956 |
| GSE43922 | Down | -0.2647520161 |
| GSE24585 | Up | 0.1722319460 |
| GSE37065 | Up | 0.0687026319 |
| GSE28863_A1 | Up | 0.0023567279 |
| GSE28863_A2 | Up | 0.0254035912 |
| GSE28863_A3 | Down | -0.5419597689 |
| GSE28863_A4 | Down | -0.3007264923 |
| GSE48662 | Down | -0.2562717865 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT020037 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT021018 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045156 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
