HCSGD entry for NID2
1. General information
| Official gene symbol | NID2 |
|---|---|
| Entrez ID | 22795 |
| Gene full name | nidogen 2 (osteonidogen) |
| Other gene symbols | NID-2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005518 | Collagen binding | TAS | molecular_function |
| GO:0005604 | Basement membrane | IEA | cellular_component |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0007160 | Cell-matrix adhesion | IEA | biological_process |
| GO:0009986 | Cell surface | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031012 | Extracellular matrix | IDA ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0968121956 | 0.0019566468 | 0.6502153100 | 0.0847054276 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6431290952 |
| GSE13712_SHEAR | Down | -3.2177276797 |
| GSE13712_STATIC | Down | -3.7459440477 |
| GSE19018 | Up | 0.9091827706 |
| GSE19899_A1 | Down | -1.6345766069 |
| GSE19899_A2 | Down | -0.4512714032 |
| PubMed_21979375_A1 | Down | -1.0958477217 |
| PubMed_21979375_A2 | Down | -0.7585200352 |
| GSE35957 | Down | -0.9369733144 |
| GSE36640 | Down | -0.7216237480 |
| GSE54402 | Down | -0.5377833994 |
| GSE9593 | Up | 0.1343816583 |
| GSE43922 | Down | -1.2355792518 |
| GSE24585 | Up | 0.5311699379 |
| GSE37065 | Down | -0.3095825203 |
| GSE28863_A1 | Up | 1.4669622317 |
| GSE28863_A2 | Up | 0.3689058087 |
| GSE28863_A3 | Up | 0.6558930109 |
| GSE28863_A4 | Up | 0.0687933291 |
| GSE48662 | Down | -0.1735073451 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022756 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-181d-5p | MIMAT0002821 | MIRT041174 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052404 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
