HCSGD entry for KCTD20
1. General information
| Official gene symbol | KCTD20 |
|---|---|
| Entrez ID | 222658 |
| Gene full name | potassium channel tetramerisation domain containing 20 |
| Other gene symbols | C6orf69 dJ108K11.3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0051260 | Protein homooligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2466135139 | 0.0084057369 | 0.9349738743 | 0.1837602990 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.9031915312 |
| GSE13712_SHEAR | Down | -0.0654969556 |
| GSE13712_STATIC | Down | -0.1402372037 |
| GSE19018 | Up | 0.9505422478 |
| GSE19899_A1 | Down | -1.0942384621 |
| GSE19899_A2 | Down | -0.0116075306 |
| PubMed_21979375_A1 | Down | -1.3160729231 |
| PubMed_21979375_A2 | Down | -0.3405279498 |
| GSE35957 | Up | 1.5975125253 |
| GSE36640 | Up | 0.2307708578 |
| GSE54402 | Down | -0.1023603136 |
| GSE9593 | Up | 0.5772976000 |
| GSE43922 | Down | -0.5449437623 |
| GSE24585 | Down | -0.4152021700 |
| GSE37065 | Down | -0.6998505127 |
| GSE28863_A1 | Up | 0.4787362651 |
| GSE28863_A2 | Up | 0.1807913532 |
| GSE28863_A3 | Down | -0.8935144980 |
| GSE28863_A4 | Down | -0.3045844716 |
| GSE48662 | Up | 0.1783818067 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-590-3p | MIMAT0004801 | MIRT016197 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-548b-3p | MIMAT0003254 | MIRT016248 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-340-5p | MIMAT0004692 | MIRT019541 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020131 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031091 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043410 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045488 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
