HCSGD entry for GPC2
1. General information
| Official gene symbol | GPC2 |
|---|---|
| Entrez ID | 221914 |
| Gene full name | glypican 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001523 | Retinoid metabolic process | TAS | biological_process |
| GO:0005578 | Proteinaceous extracellular matrix | IEA | cellular_component |
| GO:0005615 | Extracellular space | IEA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005796 | Golgi lumen | TAS | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0006024 | Glycosaminoglycan biosynthetic process | TAS | biological_process |
| GO:0006027 | Glycosaminoglycan catabolic process | TAS | biological_process |
| GO:0007224 | Smoothened signaling pathway | IEA | biological_process |
| GO:0007603 | Phototransduction, visible light | TAS | biological_process |
| GO:0030182 | Neuron differentiation | IEA | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030204 | Chondroitin sulfate metabolic process | TAS | biological_process |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
| GO:0043202 | Lysosomal lumen | TAS | cellular_component |
| GO:0043395 | Heparan sulfate proteoglycan binding | IEA | molecular_function |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9682481251 | 0.0203250218 | 0.9999902473 | 0.2761873516 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1572561980 |
| GSE13712_SHEAR | Down | -0.3956819501 |
| GSE13712_STATIC | Down | -0.1509070205 |
| GSE19018 | Down | -0.4886584102 |
| GSE19899_A1 | Down | -0.1728354449 |
| GSE19899_A2 | Down | -0.4118133289 |
| PubMed_21979375_A1 | Down | -3.0574529059 |
| PubMed_21979375_A2 | Down | -0.4919966912 |
| GSE35957 | Down | -0.1924967254 |
| GSE36640 | Down | -1.2412704101 |
| GSE54402 | Down | -0.4447537904 |
| GSE9593 | Up | 0.1196824028 |
| GSE43922 | Up | 0.0286403261 |
| GSE24585 | Down | -0.0645658767 |
| GSE37065 | Down | -0.0376506551 |
| GSE28863_A1 | Up | 0.0835303193 |
| GSE28863_A2 | Up | 0.1168390450 |
| GSE28863_A3 | Up | 0.3091167934 |
| GSE28863_A4 | Down | -0.0159159843 |
| GSE48662 | Up | 0.0428896233 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
