HCSGD entry for FCN1
1. General information
| Official gene symbol | FCN1 |
|---|---|
| Entrez ID | 2219 |
| Gene full name | ficolin (collagen/fibrinogen domain containing) 1 |
| Other gene symbols | FCNM |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001867 | Complement activation, lectin pathway | TAS | biological_process |
| GO:0003823 | Antigen binding | TAS | molecular_function |
| GO:0005509 | Calcium ion binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0005581 | Collagen | IEA | cellular_component |
| GO:0006956 | Complement activation | TAS | biological_process |
| GO:0008228 | Opsonization | TAS | biological_process |
| GO:0030246 | Carbohydrate binding | TAS | molecular_function |
| GO:0045087 | Innate immune response | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3799474070 | 0.8535784773 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1138134445 |
| GSE13712_SHEAR | Up | 0.0666386538 |
| GSE13712_STATIC | Up | 0.1533633928 |
| GSE19018 | Down | -0.0750723017 |
| GSE19899_A1 | Up | 0.1137790414 |
| GSE19899_A2 | Down | -0.0514122190 |
| PubMed_21979375_A1 | Up | 0.1214835351 |
| PubMed_21979375_A2 | Down | -0.0805715126 |
| GSE35957 | Up | 0.2006190998 |
| GSE36640 | Down | -0.0583863661 |
| GSE54402 | Up | 0.1202101896 |
| GSE9593 | Up | 0.0977965490 |
| GSE43922 | Up | 0.0365429870 |
| GSE24585 | Down | -0.0014404173 |
| GSE37065 | Down | -0.0333231692 |
| GSE28863_A1 | Up | 0.1021263740 |
| GSE28863_A2 | Up | 0.5648703482 |
| GSE28863_A3 | Up | 0.1836088313 |
| GSE28863_A4 | Up | 0.0737310328 |
| GSE48662 | Down | -0.1290997485 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
