HCSGD entry for RNF182
1. General information
| Official gene symbol | RNF182 |
|---|---|
| Entrez ID | 221687 |
| Gene full name | ring finger protein 182 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016567 | Protein ubiquitination | IDA | biological_process |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1087902207 | 0.0175439041 | 0.6834853327 | 0.2594635955 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1470365309 |
| GSE13712_SHEAR | Up | 0.6209439224 |
| GSE13712_STATIC | Up | 1.6092172525 |
| GSE19018 | Down | -0.1828741940 |
| GSE19899_A1 | Down | -0.6849373649 |
| GSE19899_A2 | Down | -1.6013840867 |
| PubMed_21979375_A1 | Down | -0.5692944658 |
| PubMed_21979375_A2 | Down | -0.9854206646 |
| GSE35957 | Down | -0.2891806035 |
| GSE36640 | Down | -0.1318782468 |
| GSE54402 | Up | 0.1803097032 |
| GSE9593 | Up | 1.8666892064 |
| GSE43922 | Down | -0.4716474839 |
| GSE24585 | Down | -0.1479796147 |
| GSE37065 | Up | 0.9527210449 |
| GSE28863_A1 | Down | -0.8790904354 |
| GSE28863_A2 | Up | 0.2970413544 |
| GSE28863_A3 | Down | -0.2870560674 |
| GSE28863_A4 | Down | -0.2419257961 |
| GSE48662 | Down | -0.3698706241 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT022017 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-27a-3p | MIMAT0000084 | MIRT028709 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-106a-5p | MIMAT0000103 | MIRT048330 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
