HCSGD entry for NT5DC1
1. General information
| Official gene symbol | NT5DC1 |
|---|---|
| Entrez ID | 221294 |
| Gene full name | 5'-nucleotidase domain containing 1 |
| Other gene symbols | C6orf200 LP2642 NT5C2L1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016787 | Hydrolase activity | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8109403670 | 0.0574143536 | 0.9999902473 | 0.4504331446 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2390459253 |
| GSE13712_SHEAR | Down | -0.2884083214 |
| GSE13712_STATIC | Up | 0.1891369901 |
| GSE19018 | Down | -0.1727203162 |
| GSE19899_A1 | Down | -0.0609996643 |
| GSE19899_A2 | Down | -0.1108985210 |
| PubMed_21979375_A1 | Down | -0.5884510321 |
| PubMed_21979375_A2 | Up | 0.1733334245 |
| GSE35957 | Up | 0.1428462647 |
| GSE36640 | Up | 0.8557250106 |
| GSE54402 | Down | -0.6081559496 |
| GSE9593 | Up | 0.0405455238 |
| GSE43922 | Up | 0.0511969751 |
| GSE24585 | Up | 0.3187902737 |
| GSE37065 | Up | 0.1555907875 |
| GSE28863_A1 | Down | -0.4628823504 |
| GSE28863_A2 | Down | -0.0509400225 |
| GSE28863_A3 | Down | -0.3107976205 |
| GSE28863_A4 | Down | -0.4866642163 |
| GSE48662 | Down | -0.2611352202 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-15a-5p | MIMAT0000068 | MIRT003876 | Microarray | Functional MTI (Weak) | 18362358 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT004370 | Microarray | Functional MTI (Weak) | 18362358 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047616 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-15a-5p | MIMAT0000068 | NA | hsa-miR-15a | 18362358 | |||
| hsa-miR-16-5p | MIMAT0000069 | NA | hsa-miR-16 | 18362358 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
