HCSGD entry for SLC39A12
1. General information
| Official gene symbol | SLC39A12 |
|---|---|
| Entrez ID | 221074 |
| Gene full name | solute carrier family 39 (zinc transporter), member 12 |
| Other gene symbols | LZT-Hs8 ZIP-12 bA570F3.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006829 | Zinc ion transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5109606892 | 0.7415927358 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3081371621 |
| GSE13712_SHEAR | Down | -0.2468790810 |
| GSE13712_STATIC | Down | -0.2856796848 |
| GSE19018 | Up | 0.0386355766 |
| GSE19899_A1 | Up | 0.1710471448 |
| GSE19899_A2 | Up | 0.1229485545 |
| PubMed_21979375_A1 | Down | -0.0880176401 |
| PubMed_21979375_A2 | Up | 0.4956611796 |
| GSE35957 | Up | 0.1029861217 |
| GSE36640 | Up | 0.0088793053 |
| GSE54402 | Up | 0.0083321654 |
| GSE9593 | Down | -0.0518259653 |
| GSE43922 | Up | 0.0132693640 |
| GSE24585 | Down | -0.0666977610 |
| GSE37065 | Up | 0.0335543167 |
| GSE28863_A1 | Down | -0.0722265292 |
| GSE28863_A2 | Up | 0.0709367551 |
| GSE28863_A3 | Up | 0.1051455197 |
| GSE28863_A4 | Up | 0.0335508180 |
| GSE48662 | Down | -0.0572075466 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019023 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
