HCSGD entry for CYB561A3
1. General information
| Official gene symbol | CYB561A3 |
|---|---|
| Entrez ID | 220002 |
| Gene full name | cytochrome b561 family, member A3 |
| Other gene symbols | CYBASC3 LCYTB |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005765 | Lysosomal membrane | IDA IEA ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016491 | Oxidoreductase activity | IEA | molecular_function |
| GO:0031902 | Late endosome membrane | IEA ISS | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0024883477 | 0.9496272938 | 0.1354064050 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.5324604076 |
| GSE13712_SHEAR | Down | -0.3508603437 |
| GSE13712_STATIC | Down | -0.1292413106 |
| GSE19018 | Down | -0.2148088522 |
| GSE19899_A1 | Up | 0.5166434125 |
| GSE19899_A2 | Up | 1.4316655788 |
| PubMed_21979375_A1 | Up | 1.3475205218 |
| PubMed_21979375_A2 | Up | 2.3390948230 |
| GSE35957 | Up | 1.4536471470 |
| GSE36640 | Up | 0.6991821473 |
| GSE54402 | Up | 0.0203468273 |
| GSE9593 | Up | 0.1180320498 |
| GSE43922 | Up | 0.6270569552 |
| GSE24585 | Up | 0.2595789749 |
| GSE37065 | Down | -0.2420380493 |
| GSE28863_A1 | Up | 0.3211424568 |
| GSE28863_A2 | Up | 0.1473319487 |
| GSE28863_A3 | Down | -0.3107592947 |
| GSE28863_A4 | Down | -0.1434243942 |
| GSE48662 | Up | 0.4193694254 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025675 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027100 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031578 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-378a-5p | MIMAT0000731 | MIRT043995 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
