HCSGD entry for FAT2
1. General information
| Official gene symbol | FAT2 |
|---|---|
| Entrez ID | 2196 |
| Gene full name | FAT atypical cadherin 2 |
| Other gene symbols | CDHF8 CDHR9 HFAT2 MEGF1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0005913 | Cell-cell adherens junction | IDA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA ISS | biological_process |
| GO:0010631 | Epithelial cell migration | IMP | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4920664146 | 0.7750639793 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1289170098 |
| GSE13712_SHEAR | Up | 0.0363356561 |
| GSE13712_STATIC | Up | 0.0470651816 |
| GSE19018 | Down | -0.0714015111 |
| GSE19899_A1 | Up | 0.0104509126 |
| GSE19899_A2 | Down | -0.0289175016 |
| PubMed_21979375_A1 | Down | -0.2461318142 |
| PubMed_21979375_A2 | Down | -0.0593348043 |
| GSE35957 | Up | 0.1192179857 |
| GSE36640 | Down | -0.1976226429 |
| GSE54402 | Down | -0.0475138295 |
| GSE9593 | Up | 0.0814405822 |
| GSE43922 | Up | 0.0155193658 |
| GSE24585 | Up | 0.0434009428 |
| GSE37065 | Down | -0.0288626696 |
| GSE28863_A1 | Up | 0.1456188339 |
| GSE28863_A2 | Up | 0.6678220408 |
| GSE28863_A3 | Up | 0.0909594495 |
| GSE28863_A4 | Up | 0.2970473682 |
| GSE48662 | Down | -0.0159664918 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-542-5p | MIMAT0003340 | MIRT039349 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-421 | MIMAT0003339 | MIRT039359 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-548b-3p | MIMAT0003254 | MIRT040508 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047135 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047514 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-3p | MIMAT0000071 | MIRT050749 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051119 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
