HCSGD entry for SMTNL1
1. General information
| Official gene symbol | SMTNL1 |
|---|---|
| Entrez ID | 219537 |
| Gene full name | smoothelin-like 1 |
| Other gene symbols | CHASM |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005516 | Calmodulin binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA ISS | cellular_component |
| GO:0005737 | Cytoplasm | ISS | cellular_component |
| GO:0008157 | Protein phosphatase 1 binding | IEA | molecular_function |
| GO:0014823 | Response to activity | IEA | biological_process |
| GO:0018105 | Peptidyl-serine phosphorylation | IEA | biological_process |
| GO:0031430 | M band | IEA | cellular_component |
| GO:0031674 | I band | IEA | cellular_component |
| GO:0042493 | Response to drug | IEA | biological_process |
| GO:0043292 | Contractile fiber | IDA | cellular_component |
| GO:0045907 | Positive regulation of vasoconstriction | IEA ISS | biological_process |
| GO:0045908 | Negative regulation of vasodilation | IEA ISS | biological_process |
| GO:0048644 | Muscle organ morphogenesis | IEA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8125754987 | 0.7479338171 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0990036427 |
| GSE13712_SHEAR | Down | -0.1672647915 |
| GSE13712_STATIC | Up | 0.0033452542 |
| GSE19018 | Down | -0.0080888651 |
| GSE19899_A1 | Up | 0.0028453208 |
| GSE19899_A2 | Up | 0.0199046574 |
| PubMed_21979375_A1 | Down | -0.0114072228 |
| PubMed_21979375_A2 | Up | 0.0887189552 |
| GSE35957 | Up | 0.1203359127 |
| GSE36640 | Up | 0.0899029201 |
| GSE54402 | Down | -0.0284318989 |
| GSE9593 | Down | -0.0854229570 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.0682536702 |
| GSE28863_A2 | Down | -0.0615902952 |
| GSE28863_A3 | Up | 0.1983912288 |
| GSE28863_A4 | Up | 0.1070730076 |
| GSE48662 | Down | -0.0818177368 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017812 | Microarray | Functional MTI (Weak) | 18185580 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
