HCSGD entry for ETV6
1. General information
| Official gene symbol | ETV6 |
|---|---|
| Entrez ID | 2120 |
| Gene full name | ets variant 6 |
| Other gene symbols | TEL TEL/ABL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0019904 | Protein domain specific binding | IPI | molecular_function |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8917652673 | 0.0749046047 | 0.9999902473 | 0.5161162565 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.7268668327 |
| GSE13712_SHEAR | Down | -0.0692013796 |
| GSE13712_STATIC | Down | -0.1908779351 |
| GSE19018 | Down | -0.7875559894 |
| GSE19899_A1 | Down | -0.1198720790 |
| GSE19899_A2 | Up | 0.0489672710 |
| PubMed_21979375_A1 | Down | -0.6354005414 |
| PubMed_21979375_A2 | Up | 0.2537239950 |
| GSE35957 | Down | -0.3791160190 |
| GSE36640 | Down | -0.4569341162 |
| GSE54402 | Up | 0.1872515356 |
| GSE9593 | Up | 0.0390833914 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.1850843406 |
| GSE28863_A2 | Down | -0.1613103944 |
| GSE28863_A3 | Down | -0.0413699024 |
| GSE28863_A4 | Down | -0.1003854344 |
| GSE48662 | Up | 0.5257975002 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-129-5p | MIMAT0000242 | MIRT004050 | In situ hybridization//Microarray//qRT-PCR | Non-Functional MTI (Weak) | 19487295 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038363 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-99b-5p | MIMAT0000689 | MIRT044195 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048962 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-129-5p | MIMAT0000242 | NA | hsa-miR-129-5p | 19487295 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
