HCSGD entry for CCDC111
1. General information
| Official gene symbol | CCDC111 |
|---|---|
| Entrez ID | 201973 |
| Gene full name | coiled-coil domain containing 111 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003682 | Chromatin binding | IDA | molecular_function |
| GO:0003887 | DNA-directed DNA polymerase activity | IDA | molecular_function |
| GO:0003896 | DNA primase activity | IDA IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005759 | Mitochondrial matrix | IDA | cellular_component |
| GO:0006264 | Mitochondrial DNA replication | IMP | biological_process |
| GO:0009411 | Response to UV | IDA | biological_process |
| GO:0019985 | Translesion synthesis | IMP | biological_process |
| GO:0030145 | Manganese ion binding | TAS | molecular_function |
| GO:0031297 | Replication fork processing | IMP | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9843637172 | 0.0027720185 | 0.9999902473 | 0.1049817266 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0636983345 |
| GSE13712_SHEAR | Down | -0.4790507541 |
| GSE13712_STATIC | Down | -0.3386404278 |
| GSE19018 | Down | -0.1535953718 |
| GSE19899_A1 | Down | -0.6244392839 |
| GSE19899_A2 | Down | -2.1443449736 |
| PubMed_21979375_A1 | Down | -0.4411937094 |
| PubMed_21979375_A2 | Down | -1.2823225550 |
| GSE35957 | Down | -0.9851019677 |
| GSE36640 | Down | -1.7171045359 |
| GSE54402 | Down | -0.7184696807 |
| GSE9593 | Down | -0.4712538898 |
| GSE43922 | Down | -0.5961216248 |
| GSE24585 | Up | 0.2269723938 |
| GSE37065 | Down | -0.0530822070 |
| GSE28863_A1 | Up | 0.2942350369 |
| GSE28863_A2 | Up | 0.1471523664 |
| GSE28863_A3 | Down | -0.2543022781 |
| GSE28863_A4 | Down | -0.1555079095 |
| GSE48662 | Down | -0.4083621985 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024955 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026857 | Microarray | Functional MTI (Weak) | 19074876 |
Entries Per Page
Displaying Page of
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-15a-5p | MIMAT0000068 | NA | hsa-miR-15a | 18362358 | |||
| hsa-miR-16-5p | MIMAT0000069 | NA | hsa-miR-16 | 18362358 |
Entries Per Page
Displaying Page of
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
