HCSGD entry for TMEM17
1. General information
| Official gene symbol | TMEM17 |
|---|---|
| Entrez ID | 200728 |
| Gene full name | transmembrane protein 17 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007224 | Smoothened signaling pathway | ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0035869 | Ciliary transition zone | ISS | cellular_component |
| GO:0036038 | TCTN-B9D complex | ISS | cellular_component |
| GO:0042384 | Cilium assembly | ISS | biological_process |
| GO:0060170 | Ciliary membrane | ISS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0825184529 | 0.4727341704 | 0.6060337702 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1576584572 |
| GSE13712_SHEAR | Down | -0.0783054729 |
| GSE13712_STATIC | Up | 0.4646588596 |
| GSE19018 | Down | -0.2529704555 |
| GSE19899_A1 | Down | -0.0916720841 |
| GSE19899_A2 | Up | 0.3584394991 |
| PubMed_21979375_A1 | Down | -0.7416195858 |
| PubMed_21979375_A2 | Up | 0.5176134342 |
| GSE35957 | Up | 0.5781708572 |
| GSE36640 | Up | 1.5719927701 |
| GSE54402 | Up | 0.1419421661 |
| GSE9593 | Up | 0.8210276792 |
| GSE43922 | Down | -0.1578854014 |
| GSE24585 | Down | -0.6004052405 |
| GSE37065 | Down | -0.0765353246 |
| GSE28863_A1 | Up | 0.0579341656 |
| GSE28863_A2 | Up | 0.0141202464 |
| GSE28863_A3 | Down | -0.1289758372 |
| GSE28863_A4 | Up | 0.0008937729 |
| GSE48662 | Up | 0.2952717655 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT026578 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
