HCSGD entry for NLRC3
1. General information
| Official gene symbol | NLRC3 |
|---|---|
| Entrez ID | 197358 |
| Gene full name | NLR family, CARD domain containing 3 |
| Other gene symbols | CLR16.2 NOD3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0007249 | I-kappaB kinase/NF-kappaB signaling | IDA | biological_process |
| GO:0031396 | Regulation of protein ubiquitination | IEA | biological_process |
| GO:0032088 | Negative regulation of NF-kappaB transcription factor activity | IDA | biological_process |
| GO:0032496 | Response to lipopolysaccharide | IEA | biological_process |
| GO:0042110 | T cell activation | IEP | biological_process |
| GO:0043124 | Negative regulation of I-kappaB kinase/NF-kappaB signaling | IEA IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4023040690 | 0.4033224384 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0658898106 |
| GSE13712_SHEAR | Up | 0.9171261955 |
| GSE13712_STATIC | Up | 0.2467819176 |
| GSE19018 | Down | -0.0820870461 |
| GSE19899_A1 | Up | 0.0527302666 |
| GSE19899_A2 | Down | -0.0245080221 |
| PubMed_21979375_A1 | Down | -0.5355369600 |
| PubMed_21979375_A2 | Down | -0.2775321634 |
| GSE35957 | Up | 0.1112965576 |
| GSE36640 | Up | 0.1145524736 |
| GSE54402 | Up | 0.0079392747 |
| GSE9593 | Down | -0.1281470213 |
| GSE43922 | Up | 0.1080308501 |
| GSE24585 | Down | -0.2088969889 |
| GSE37065 | Down | -0.0409903168 |
| GSE28863_A1 | Down | -0.2835510137 |
| GSE28863_A2 | Down | -0.3132518037 |
| GSE28863_A3 | Up | 0.4169110048 |
| GSE28863_A4 | Up | 0.1991695601 |
| GSE48662 | Up | 0.0523455190 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
