HCSGD entry for ARID2
1. General information
| Official gene symbol | ARID2 |
|---|---|
| Entrez ID | 196528 |
| Gene full name | AT rich interactive domain 2 (ARID, RFX-like) |
| Other gene symbols | BAF200 p200 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006337 | Nucleosome disassembly | IDA | biological_process |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0016568 | Chromatin modification | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8800866153 | 0.0709948444 | 0.9999902473 | 0.5031382068 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1712503491 |
| GSE13712_SHEAR | Down | -0.2321492533 |
| GSE13712_STATIC | Down | -0.0227555964 |
| GSE19018 | Up | 0.2019958265 |
| GSE19899_A1 | Down | -0.0180033923 |
| GSE19899_A2 | Down | -0.7542080338 |
| PubMed_21979375_A1 | Up | 0.1691441287 |
| PubMed_21979375_A2 | Down | -0.5664888019 |
| GSE35957 | Down | -0.3271595563 |
| GSE36640 | Down | -0.6812228915 |
| GSE54402 | Down | -0.2051970199 |
| GSE9593 | Down | -0.4543411992 |
| GSE43922 | Up | 0.0067943427 |
| GSE24585 | Up | 0.0379500656 |
| GSE37065 | Up | 0.1649890524 |
| GSE28863_A1 | Up | 0.5655398069 |
| GSE28863_A2 | Up | 0.3535778506 |
| GSE28863_A3 | Down | -0.7036944842 |
| GSE28863_A4 | Down | -0.0404152655 |
| GSE48662 | Down | -0.1003024598 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT001384 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT001569 | Luciferase reporter assay | Functional MTI | 18367535 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT001569 | pSILAC//Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT001569 | Reporter assay;Other | Functional MTI | 20584899 |
| hsa-miR-424-3p | MIMAT0004749 | MIRT038009 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046521 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
