HCSGD entry for ECM2
1. General information
| Official gene symbol | ECM2 |
|---|---|
| Entrez ID | 1842 |
| Gene full name | extracellular matrix protein 2, female organ and adipocyte specific |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005178 | Integrin binding | TAS | molecular_function |
| GO:0005578 | Proteinaceous extracellular matrix | TAS | cellular_component |
| GO:0005614 | Interstitial matrix | IEA | cellular_component |
| GO:0007160 | Cell-matrix adhesion | TAS | biological_process |
| GO:0008201 | Heparin binding | IEA | molecular_function |
| GO:0010811 | Positive regulation of cell-substrate adhesion | IEA | biological_process |
| GO:0030198 | Extracellular matrix organization | IEA | biological_process |
| GO:0070052 | Collagen V binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2584681623 | 0.1325256791 | 0.9522573466 | 0.7012379421 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6096406389 |
| GSE13712_SHEAR | Up | 0.0368161546 |
| GSE13712_STATIC | Up | 0.0205250136 |
| GSE19018 | Up | 0.1055813836 |
| GSE19899_A1 | Down | -0.0703075774 |
| GSE19899_A2 | Down | -0.1787529888 |
| PubMed_21979375_A1 | Down | -0.1745216926 |
| PubMed_21979375_A2 | Down | -0.3796793381 |
| GSE35957 | Up | 0.7081930554 |
| GSE36640 | Down | -0.0264495738 |
| GSE54402 | Down | -0.0334047499 |
| GSE9593 | Down | -0.4586129128 |
| GSE43922 | Up | 0.0221013243 |
| GSE24585 | Down | -0.0019578744 |
| GSE37065 | Down | -0.6090259643 |
| GSE28863_A1 | Up | 0.9924427535 |
| GSE28863_A2 | Up | 0.5089679507 |
| GSE28863_A3 | Up | 0.3235502585 |
| GSE28863_A4 | Down | -0.0826732756 |
| GSE48662 | Up | 0.1197525932 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027441 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037131 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
