HCSGD entry for COMMD6
1. General information
| Official gene symbol | COMMD6 |
|---|---|
| Entrez ID | 170622 |
| Gene full name | COMM domain containing 6 |
| Other gene symbols | Acrg |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0032088 | Negative regulation of NF-kappaB transcription factor activity | IDA | biological_process |
| GO:0051059 | NF-kappaB binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8663976901 | 0.3465378215 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0197687877 |
| GSE13712_SHEAR | Down | -0.1036079894 |
| GSE13712_STATIC | Up | 0.0970136869 |
| GSE19018 | Up | 0.1578622284 |
| GSE19899_A1 | Down | -0.0647782481 |
| GSE19899_A2 | Up | 0.0058590891 |
| PubMed_21979375_A1 | Up | 0.2698632046 |
| PubMed_21979375_A2 | Up | 0.0080363332 |
| GSE35957 | Down | -0.0716540612 |
| GSE36640 | Up | 0.3151581115 |
| GSE54402 | Down | -0.1706952781 |
| GSE9593 | Up | 0.1482031979 |
| GSE43922 | Down | -0.0036423347 |
| GSE24585 | Up | 0.0110238968 |
| GSE37065 | Down | -0.3458526442 |
| GSE28863_A1 | Down | -0.0001528947 |
| GSE28863_A2 | Down | -0.4493259713 |
| GSE28863_A3 | Down | -0.1351657643 |
| GSE28863_A4 | Down | -0.0197157874 |
| GSE48662 | Down | -0.0401074545 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020456 | Microarray | Functional MTI (Weak) | 17242205 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
