HCSGD entry for COCH
1. General information
| Official gene symbol | COCH |
|---|---|
| Entrez ID | 1690 |
| Gene full name | cochlin |
| Other gene symbols | COCH-5B2 COCH5B2 DFNA9 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005578 | Proteinaceous extracellular matrix | IEA | cellular_component |
| GO:0007605 | Sensory perception of sound | IEA | biological_process |
| GO:0008360 | Regulation of cell shape | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9580706926 | 0.2964734737 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0244730878 |
| GSE13712_SHEAR | Up | 0.0217431117 |
| GSE13712_STATIC | Down | -0.0231822896 |
| GSE19018 | Down | -0.0605850901 |
| GSE19899_A1 | Down | -0.1538311274 |
| GSE19899_A2 | Down | -0.0678924319 |
| PubMed_21979375_A1 | Up | 0.0178758704 |
| PubMed_21979375_A2 | Down | -0.0885209316 |
| GSE35957 | Down | -0.3250702043 |
| GSE36640 | Up | 0.1262460888 |
| GSE54402 | Down | -0.0660963337 |
| GSE9593 | Down | -0.0927514590 |
| GSE43922 | Up | 0.0233214476 |
| GSE24585 | Up | 0.1383247106 |
| GSE37065 | Down | -0.1392377179 |
| GSE28863_A1 | Down | -0.3446316726 |
| GSE28863_A2 | Down | -0.1746396371 |
| GSE28863_A3 | Up | 0.0129068518 |
| GSE28863_A4 | Up | 0.0016069591 |
| GSE48662 | Down | -0.0600433160 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024817 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026238 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-1301-3p | MIMAT0005797 | MIRT036032 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039747 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043422 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
