HCSGD entry for PRICKLE2
1. General information
| Official gene symbol | PRICKLE2 |
|---|---|
| Entrez ID | 166336 |
| Gene full name | prickle homolog 2 (Drosophila) |
| Other gene symbols | EPM5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016327 | Apicolateral plasma membrane | IEA | cellular_component |
| GO:0016328 | Lateral plasma membrane | IEA | cellular_component |
| GO:0031175 | Neuron projection development | IEA | biological_process |
| GO:0031965 | Nuclear membrane | IEA | cellular_component |
| GO:0045197 | Establishment or maintenance of epithelial cell apical/basal polarity | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0088163900 | 0.6791599103 | 0.2414736733 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1379899720 |
| GSE13712_SHEAR | Down | -1.2073372760 |
| GSE13712_STATIC | Up | 0.0606532411 |
| GSE19018 | Up | 0.1138989550 |
| GSE19899_A1 | Up | 0.9051948578 |
| GSE19899_A2 | Up | 0.0479637440 |
| PubMed_21979375_A1 | Up | 0.9052388783 |
| PubMed_21979375_A2 | Up | 1.6031726573 |
| GSE35957 | Down | -0.1635602318 |
| GSE36640 | Up | 1.6585380158 |
| GSE54402 | Up | 0.9973550829 |
| GSE9593 | Up | 0.0207674458 |
| GSE43922 | Up | 0.1619571187 |
| GSE24585 | Up | 0.0107542599 |
| GSE37065 | Up | 0.1233679902 |
| GSE28863_A1 | Up | 0.6120377074 |
| GSE28863_A2 | Up | 0.3955615976 |
| GSE28863_A3 | Down | -0.0925835005 |
| GSE28863_A4 | Down | -0.2760907967 |
| GSE48662 | Down | -0.1354117213 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017351 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030840 | Microarray | Functional MTI (Weak) | 18591254 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
