HCSGD entry for CHST13
1. General information
| Official gene symbol | CHST13 |
|---|---|
| Entrez ID | 166012 |
| Gene full name | carbohydrate (chondroitin 4) sulfotransferase 13 |
| Other gene symbols | C4ST3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0001537 | N-acetylgalactosamine 4-O-sulfotransferase activity | IDA | molecular_function |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
| GO:0016051 | Carbohydrate biosynthetic process | IEA | biological_process |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030204 | Chondroitin sulfate metabolic process | TAS | biological_process |
| GO:0030206 | Chondroitin sulfate biosynthetic process | IDA TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0047756 | Chondroitin 4-sulfotransferase activity | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5665863987 | 0.7323060256 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1412120675 |
| GSE13712_SHEAR | Down | -0.0574887931 |
| GSE13712_STATIC | Down | -0.0174958185 |
| GSE19018 | Down | -0.0510901924 |
| GSE19899_A1 | Up | 0.0224878776 |
| GSE19899_A2 | Down | -0.1563178531 |
| PubMed_21979375_A1 | Down | -0.1011132676 |
| PubMed_21979375_A2 | Down | -0.0215061298 |
| GSE35957 | Up | 0.0643107595 |
| GSE36640 | Up | 0.1941061175 |
| GSE54402 | Down | -0.0883281872 |
| GSE9593 | Up | 0.0021576458 |
| GSE43922 | Up | 0.1106522792 |
| GSE24585 | Down | -0.0459517543 |
| GSE37065 | Down | -0.0629154193 |
| GSE28863_A1 | Down | -0.0437714361 |
| GSE28863_A2 | Up | 0.1824971286 |
| GSE28863_A3 | Up | 0.4854593940 |
| GSE28863_A4 | Up | 0.1795983363 |
| GSE48662 | Up | 0.1539016778 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
